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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92886171
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSTGTLAAA DSLYVLFLLL ICYYGTIVSA YTKYNTGAGI VKGKLNVHLV PHSHDDVGWL  60
   61 KTVDQYYVGS NNSIQGACVE NVLDSIVFSL QKDPNRKFVF AEMAFFHRWW VEQSPEIQEQ 120
  121 VKRLVAAGQL EFVNGGWCMH DEATVHYIDM IDQTTLGHRF IKDQFNTTPR AGWQIDPFGH 180
  181 SAVQGYLLGA ELGFDSVHFA RIDYQDRAKR KSDKSLEVIW RGSKTFGSSA QIFANTFPVH 240
  241 YSAPHGFNFE VSGDFVPLQD DPLLFDSNVE QRVKDFIDAA ITQANVTRTN HIMWTMGDDF 300
  301 QYQYAESWFK QMDKLIHYVN KDGRVNALYS TPSIYTDAKN AANQLWPLKT DDYFPYADGA 360
  361 NAYWTGFFTS RPALKRYVRI LSGYYLAARQ LEFFAGKRST LDDTFGLGDA LGIAQHHDAV 420
  421 TGTAKQHTTD DYAKRLAIGA SKAEVVVSTS LAVLASKKSG DQRSALASAF SQCQLLNISY 480
  481 CPPTEDSIPQ AKDLVVVVYN PLGWNRTDIV RIPVNEANLV VKDSSGNKVE VQYVDVDDVT 540
  541 TDLRKLYVKA YLGLRPKQAP KYWLLFQVSI PPLGWSTYFI SKAAGKGIRR KGDLSHLNSK 600
  601 NGENIDIGPG NLKMSFSSTS GQLKRMYNFK TGVNIPIQQS YFRYGSSEGD NTDSQASGAY 660
  661 IFRPSESSPT IVSRSVPFKV IRGPLVDEVH QKFNSWIYQV TRLYKGKDHA EIEYTIGPIP 720
  721 TDDGVGKEVI TRMTANMVTN KEFYTDSNGR DFLKRVRDHR EDWPLQVTQP VAGNYYPLNL 780
  781 GIYTKDKKSE FSVLVDRATG GASIKDGEVE LMLHRRLIED DGRGVGEPLD EQVCIAKADN 840
  841 NSTCDGLTVR GNYYIGIHNV GAGSRWRRTT GQEIYSPILL AFTHEKSKNW KSSHLTKGTL 900
  901 MDPNYSLPPN VALITLEELD GGIVLLRLAH LYEPNEDAQY SALAKVELKK LFATKTIKEL 960
  961 KEVSLSANQE KSEMKKMTWK VEGDKGQEPQ AVRGSPVSTS DFVVELGPME IRTFLLEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle