YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92886003
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDIVSEHES EKTVEIVLKT IGPAPPSRLR VPSSIKVRDL RRLIASNGHL PIDNLSLILR  60
   61 GTALCDLKNG DDVRMQLNDG DSLIVAVKPK PPVKDGHDND DDDEDLKFQL PQSSSRWKKK 120
  121 LYSFLHDKLK LPDIILMVIF TLSLKAWVLI IMWFILAPVA HRWDLGPLYI LATGFCLILF 180
  181 NLGKRKAGDS SAYSIFNEDF RELPGTLNAD RFDRDIRAGQ F

Type	Start	End	Confidence
Cytoplasmic	1	133	0.99
Transmembrane Helix	134	157	0.91
Non-Cytoplasmic	158	164	0.84
Transmembrane Helix	165	183	0.95
Cytoplasmic	184	221	0.98