YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92882264
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVQLRLQTK FGAWNRNCIG VTRCSSDREE KLKVKEAVVW SPAEELAKKF ERRLLVGIGS  60
   61 ASLVALGANF GGITSFFLGL SPQNGRKLKL DVLYPIGGYT RYIDTREGFE FIYPVNWVGD 120
  121 QTLLYRAAKR REMELSLDPP PLNLRPRSNV NEPVVAFGPP GSNGELNVSV IVSPVALDFS 180
  181 IEAFGSPEEV GEAVIRTITG SGQRPDVKGT LVKSSLREDT VRNAKYYELE FRVESPSFRR 240
  241 HNVCVCCARG GRLFTLNAQA PESTWPGVKP DFYTIADSFN LTT

Type	Start	End	Confidence
Cytoplasmic	1	53	0.96
Transmembrane Helix	54	78	0.86
Non-Cytoplasmic	79	283	0.98