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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92881657
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFVFGVVVG IIVGLAIIIA FVRSENSRSA RRSQLATTIA AFARMTVEDS RKLLPSQFYP  60
   61 SWVVFSNRQK LTWLNSHLTK IWPYVNEAAS ELIKTSAEPI LEEYRPMILS ALKFSKFTLG 120
  121 TVAPQFTGVS IIEDGGDGVT MELEVQWDGN PSIILDIKTL VGLALPVQVK NVGFTGVFRL 180
  181 IFKPLVNEFP GFGAVCYSLR QKKKLDFTLK VIGGDISTIP GLYDAIEGAI RDAVEDSITW 240
  241 PVRKIVPILP GDYSDLELKP VGILEVKLVQ AKELTNKDII GKSDPYAVLY IRPLRNRTKK 300
  301 SKTINNDLNP IWNEHFEFIV EDASTQHLFV KVYDDEGLQS SELIGCTDIK LSELEPGKIK 360
  361 DVWLKLVKDL EIQRDNKNRG QVHLELLYCP YGTENSFTNP FARNYSMTSL EKVLKGSSNG 420
  421 IDSNGNESEA AQRKKEVIIR GVLSVTVISA EDLPAVDFMG KSDPFVVLTL KKAETKNKTR 480
  481 VVNNSLNPVW NQTFDFVVED GLHDMLLVEV YDHDTFGKDY MGRVILTLTR AILEGEYKER 540
  541 FELDGAKSGF LNLHLKWMPQ SIYRDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle