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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92879194
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPIDRFAL PCFEGSSGSD EKRTERKSDF KISGSSSNGG GSLKKKVSSK IKHSLKKKSG  60
   61 RRKSDGRVSS VSIEDIRDVE ELQAVDAFRQ SLIAEELLPK KHDDYHLMLR FLKARKFDIE 120
  121 KAKNMWADML QWRKEFGADT IMEDFEFNEI NEVVKYYPHG HHGVDKEGRP VYIERLGKVD 180
  181 PNKLMQVTTM DRYVKYHVRE FEKSFAIKFP ACTIASKRHI DSSTTILDVQ GVGLKNFSKA 240
  241 ARELIMRLQK IDGDNYPETL HQMFIINAGP GFRMLWNSVK SFIDPKTTSK IHVLGNKYQS 300
  301 KLLEVINASE LPEFLGGTCT CLDQGGCLRS DKGPWNNPEI MKMILSGEAG RPRQVVKVLN 360
  361 SEGKVIAYAK PRCPMVKGSD TSTAESGSEA EDIASPKVVK SYSHLRLTPV REEAKVVGKS 420
  421 SYAVSGDLAG YDEYIPMVDK AVDAVWKKQA SLHRSHSTKV SITGTPPLPD TPKLPEGIQA 480
  481 RIWVALTVFS WTMFSLFRSL ACRMTKKLPS VSSNNYQSTS ELTLDTTNKE DYTETSVFCS 540
  541 MMKRLGELEE KVDTLKSKPS EMPRQKAELL NVAVYRVDAL EAELIATKKA LYEALMRQEE 600
  601 LLAYIDSQEE AKLRKKKFCW 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle