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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92877971
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPNTQASFS TGPPHVTYFH RVTVSRAVPS HTHLPPPNQK LRQFRTAKRR RVNLSITAAK  60
   61 KTEHHDGNNG VERTECSPAR SNRRGVLMAP FLAAGASFLL SAATTRAAEE EKLKENTAPV 120
  121 EATVVKPEEV KKIEEEVITS RIYDATAIGE PLAIGKEKGK VWEKLMNARV VYLGEAEQVP 180
  181 VRDDKELELE IVKNLHKRCV EVDKRLSLAI EAFPSNLQEP LNQYMDKKMD GETLKSYTTH 240
  241 WPPERWQEYE PILSYCRENG IRLVACGTPL KILRTVQAEG ISGLTKAERK LYAPPAGSGF 300
  301 ISGFSSMSRR YSADSTPNLS FPFGPSSYLS AQARVVDEYT MSQTILQNML DGGATGMLIV 360
  361 VTGASHVTYG ARGTGVPARI SRKLQKKNQV VILLDPERQF IRSEGEVPVA DFLWYSAARP 420
  421 CSRNCFDRVE IARVMNAAGQ RRDALPQDLQ KGIDLGLVSP EVLQNFFDLE KYPLLSELTH 480
  481 RFQGFRERLL ADPKFLQRLA IEEGISVTTT LLAQYQKRKE NFFQELDYVI TDTVRGSVVD 540
  541 FFTVWLPAPT LSFLSYADET IAPDNISSLI GLLGSIPDNA FQKNPVGTNW NLNHRIASVV 600
  601 FGGLKLAGVG FISSIGAVAS SNSLFAVRKF LNPAIITNKQ IARSPILKTA VVYALFLGIS 660
  661 ANLRYQIIAG VVEHRISDQF ASQTFLVNML SFVSRTINSY WGTQQWIDLA RSTGLQVRKT 720
  721 ESPEPPTSDS PNQAAILCDS TGLQVRETES PEPPSSDSPN QTAILCNEAE EASIDDIKSE 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle