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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92877766
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKWICQLL SLATLLISYN VYVCECQEPE ALPPSAENCN GVFISYDFLD RRKGFPRVKN  60
   61 VTAQSWSFNA TATVLNTGKD VLKAWKLFIG FQHHEILVSA NGGIPFEAGD FPSSVGNGTT 120
  121 LVGSSLPDLE TSIDTANDLS QIQALIQIAG TQFGVRPPAI PMPKNIKLVN DGFKCPRPSV 180
  181 RKSSMWACCK SDPKFKSKLL KTKFLPRQKG DLTIAYDVLQ SYDSSYLVQV TIDNNNPLGR 240
  241 LDHWNLTWEW TRGEFIQTMK GAFTREITYT GCVYGVAGQY YKDMDFSKVI NCQKNPVISD 300
  301 LPPEKYNDTE IGKIPFCCRN GTLLPILMDP SQSKSIFQMQ VFKCPPDLDK KSIFPPARWK 360
  361 IMGVLNSAYT CGPPLKVEPT KFPDPRGLDA TTYSIVSWQI VCNITKPKHR STRCCVSFSS 420
  421 YYNDSIVPCN TCACGCDDDD TNRHCNPNAR AMLLPSEALL VPFENRTLKT VAWAKLKHFR 480
  481 VPKKLPCGDN CGVSINWHIV SDYKGGWSAR ITLFNWKPFP FENWFTAMQF KKSVSLGFEK 540
  541 VYSFNGSLLT KFNNTIFMQG LQGTSYLIGE DNGTYLKVPG KQQSVISFTK KFKPNMQIAK 600
  601 GDGFPSKVLF NGEECSIPTQ FPMQTANQQN SLYLSCADHI WAMIHPCDAL EPSLVKSNTL 660
  661 RPHKHSLKEN SEQDGSCQEM FLEARYYSFV MAVTLFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle