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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92876756
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSDIQSPK AVDKIDRVGS LKKILRDSLT RRSRRSSSKV MSVEIEDIRD ADDLKAVDEF  60
   61 RQALILDELL PEKHDDYHML LRFLRARKFE IEKSKQMWSD MLQWRKEFGT DTVVEDFEFE 120
  121 ELEEVVQYYP HGNHGVDKEG RPIYIERLGQ VDATKLLQVT TMDRYVKYHV KEFERTFDLK 180
  181 FPACTIAAKK HIDQSTTILD VQGVGLKNFN KQARDLITRL QKIDGDNYPE TLNRMFIINA 240
  241 GSGFRMLWNT VKSFLDPKTT AKIHVLGNKY QSKLLEIIDA SELPEFLGGT CTCADQGGCM 300
  301 RSDKGPWKDP EIIRMVQNGE HKTSRKIEAP IVEEKTPEES QASKMEAVFT AQLSTVYAKA 360
  361 PSSKACNYED LVPMADKTAW QMVEKTKSFA VPKAEVEALT VPDSCKIHEK VNSQIFTGMM 420
  421 AFVMGLITMV RMTRNMPKRL TDANFYSNSV YSGGDFKTED SNDQLTNPTI SAQEFMTVMK 480
  481 RMAELEDKMG NMNTTTCMPP EKEEMLNAAI SRADALEQEL MATKKALEDS LAKQEELSAY 540
  541 INEKKKKKKK LFQWA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle