YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92875603
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPILSLAL PSETGRVLSI QSHTVQGYVG NKSAVFPLQL LGYDVDPINS VQFSNHTGYP  60
   61 SFKGQVLNGQ QLWDLIEGLE ANDLLYYTHL LTGYIGSVSF LNTVLDVVSK LRSINPKLTY 120
  121 VCDPVLGDEG KLYVPQELVT VYRERVVPIA SMLTPNQFEA ELLTGLRIQS EEDGREACNS 180
  181 IHAAGPSKVV ITSINVDGNL LLIGSHLKEK GNPPKQFKIA IPKIPAYFTG TGDLMTALLL 240
  241 GWSNKHPDNL EKAAELAVSS LQALLQRTLD DYKSAGHDPK SSSLEIRLIQ SQDDIRSPQI 300
  301 TFKAEIYS

Type	Start	End	Confidence
Signal Peptide	1	19	0.50
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	308	0.98