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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92875132
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLSLSSFF FFFFTLSFFS FTFSIIASTE FDFGTLTLTS LKLLGDAHLN NGTVTLTRDL  60
   61 TVPFSGAGQA LYSRPIRFRQ PGTTTPASFT TFFSFSVTNL NPSSIGGGLA FIISPDDESL 120
  121 GDAGGYLGLA GNGFVAVEFD TLMDVEFKDI NGNHVGVDLN SVVSSKVGDL DSIGVDLKSG 180
  181 DSVNAWIEFD GSNNGFNVWV SYSNLKPKDP ILTMNLDMGL YLNDFMYVGF SGSTQGSTEI 240
  241 HRIEWWSFSS SFMTGSGGLS PPPAVSMMNT TANSARSPPP SMAPTMNSSN EERKESKKSC 300
  301 HNGLCKQGLG AVAGVVTAGA FVLALFAGSM IWLYSKKVKR VSRFDSLGSE IIKMPKQFSY 360
  361 KELKSATKCF NANRIIGHGA FGTVYKGILT ENGDIIAVKR CSHSSQGKNE FLSELSIIGS 420
  421 LRHRNLVRLQ GWCHEKGEIL LVYDLMPNGS LDKALFEART PLPWPHRRKI LLGVASALAY 480
  481 LHQECENQVI HRDIKTSNIM LDEGFNARLG DFGLARQTEH DKSPDATVAA GTMGYLAPEY 540
  541 LLTGKATDKT DVFSYGAVVL EVASGRRPIE KDAAGVGKVG VSSNLVEWVW SLHREGRLLA 600
  601 AVDPRLEGEF DEAGMTRVLL VGLACSHPDP LARPTMRSVV QMLGGEAEVP IVPRTKPSTG 660
  661 LSTSHSHLLM SLQDSVSDCD GILTISTSTS ENSFNGGDIV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle