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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92873588
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFSRIGRSL SRSSRVKNLL HGETRLGTLY GVSRTNVFVD DVEKGLGFVR GYVSSAIARN  60
   61 NGFGSNLYDF KSIAANRMLH RMFSSESPKK KNYEKFYPKE KKEVPKGEEK KSESKDESKS 120
  121 NTEDGGSFHE AFIKQFQNYL TPLLVVGLFL SSLSLGPRDQ QQISFQEFKN KLLEPGLVDH 180
  181 IVVSNKSVAK IYVRNSPLNQ ADSEVQGTLP AKGSGGQYKY IINIGSVESF EEKLEEAQEA 240
  241 LGVDSHNFVP VTYSSEMVWY QELMRFAPTL LLLGTLWFMG RKMQGGFGVG GGSTGKGSRG 300
  301 IFNIGKAHVT KVDKNTKNKV YFKDVAGCEE AKQEIMEFVH FLKNPKKYEE LGAKIPKGAL 360
  361 LVGPPGTGKT LLAKATAGES GVPFLSISGS DFMEMFVGVG PSRVRNLFQE ARQCAPSIVF 420
  421 IDEIDAIGRK RGRGGFSGSN DERESTLNQL LVEMDGFGTT AGVVVLAGTN RADILDNALL 480
  481 RPGRFDRTIS IDVPDIKGRD QIFQIYLKKI KLDHEPSYYS QRLAALTPGF AGADIANVCN 540
  541 EAALIAARTD ESQVTMDHFE AAIDRIIGGL EKKNRVISKR ERRTVAYHEA GHAVAGWFLE 600
  601 HCEPLLKVTI VPRGTAALGF AQYVPSENLL RTKEQLLDMT CMTLGGRAAE QVLIGAISTG 660
  661 AQNDLEKVTK MTYAQVAIYG FSEKVGLLSF PQNEDQFGKP YSGDTGNIID QEVRDWVNHA 720
  721 YERTVQLIEE HKEKLAQIAE LLLEKEVLHQ EDLVRILGER PFKSAEPTNY DRFKLGFQDE 780
  781 EKAAETTVDE AEEGSGSSPL EPEVVPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle