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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92873213, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYGRLGLSD PGGSTPSQPI INTTKPRSSK KKIIFLSLLA VLLIIASTIS AAMLTGIHSH  60
   61 TTSEPKNPTL RRNPTQAISN TCSKTRFPSL CINYLLDFPD STGASEKDLV HISLNMTLQH 120
  121 LSKALYTSAS ISSTVGINPY IRAAYTDCLE LLDNSVDALA RALTSAVPSS SSNGAVKPLT 180
  181 SSSTEDVLTW LSAALTNQDT CAEGFADTSG DVKDQMTNNL KDLSELVSNC LAIFSAGGGD 240
  241 DFSGVPIGNR RRLMTMPEPE DDFPVWLKRR ERRLLSLPVT TIQADVIVSK DGNGTVKTIS 300
  301 EALKKIPEYG NRRFIIYIKQ GRYEEDNLKV GRKKTNVMII GDGKGKTVIT GGKNVMQNLT 360
  361 TFHTASFAAS GPGFIAKDMT FENYAGPAKH QAVALRVSSD HAVVYRCNVI GYQDTMYAHS 420
  421 NRQFYRECDI YGTVDFIFGN AAVVFQNCSL YARKPMPYQK NTITAQNRKD PNQNTGISIH 480
  481 NCRILATQDL EASKGNFTTY LGRPWKLYSR TVYMLSYMGD HVHPRGWLEW NTTFALDTLY 540
  541 YGEYMNYGPG GAIGQRVKWP GYRVITSTVE ANRFTVAQFI SGSTWLPSTG VAYVAGLST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle