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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92872679
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKLATTFP ISASNADQSS RRPTGKPNKN PSKPKVDPQS HPALKFSNIP KQKLKPVNKT  60
   61 PENVKISEDG VSYVIEGAPF EFKYSYTETP KSKPVQMREP PFVPFGPVTM PRPWTGRPPL 120
  121 PPSKKKLKEF DSFVLPPPHK KGVKPVQSPG PFLPGTSPRY VMSREEVLGE PLTKEEINEL 180
  181 VRSTLKSSRQ LNLGRDGFIH NMLDNIHAHW KRRRVCKIKC IGVCTVDMDN VCQQLEEKTG 240
  241 GKVIYRRGGV IYLFRGRNYN HKTRPRFPLM LWKPVPPVYP RLIQQVPEGL TLEEATEMRQ 300
  301 KGRTLTPICK LGKNGVYYNL VNNVREAFEE CELVRVNCQG LNKSDYRKIG AKLRDLVPCT 360
  361 LLSYENEHIL MWRGRNWKSS FPDLVEDFKE ATKADADNKN DKTLQSEALD VSTPSLNHNP 420
  421 VEHVSNLSHD TSISFCPDDV TVDKVPCPTK NSKQSMSVVA DASLTKVYEA ETTNVATDSY 480
  481 GEPESCSNTS PGMTISHDSR HTECPSNAIS DSHGTSDIMD DKGFGDCLST SISGSNAMLG 540
  541 SRNSNIYGTV DPHADELLND SGAADVSPLP RAAAPFMKGI SLLLEQAVEQ GNALVLDKDS 600
  601 LDADNVYRTT VSFAQSAPPG PVFMKHRKVA VQKSDKQEAL TPETRETTTV TTKGTTVATK 660
  661 GKRERSPRIR RKENFDERFM NLVPQGTLGV DELAKLLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle