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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92872100
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCNSEGQLDD AQFSKPMPWI GIYIATASLL CLISMSADLI KGIKTRKLWF PCKYFCLNAT  60
   61 SLTIIAVSLK LSVDLNTPMP HRHDQLAKLA SSALICTIMA NSMPSLGVTP NNETMLNVLA 120
  121 MAILVVTMIV NICIQFGTGV IYEFWIEHGV IMFLMVILLM IMISSALCLP KMKHYMELKY 180
  181 KVNEDALREE SKQKRHEYNK VTDKLRDELM KFWMMAHTSG PQFLLGRSVS CTASGAFCVL 240
  241 STLTLLEAML RSYLMSWSVK FCAGESDYKW SIILILIVQV AAVGVGTIAP AFRWFAAVKY 300
  301 RCPNVRERSR KRIFQVEGYW TDSLVVFRES PISFRIGNRW FRKLAHDVKL IMLCFCIKLQ 360
  361 MGMVRVCKAA QFVSIYPMLW ILGFCEFFKN WKSKFGGIDS GLGTGRKQDL KRFILHLEGE 420
  421 EELVEVMMKH NCDATAHWIE QGEKKQPKLV IELLEQKCSM LHGFKGVGEF DCDQILPLHG 480
  481 VEPPYNWSLP IVTLASIIVA LPNMEKCLVK ILISTVNEAL PYVKFIENNI DKEGKLIKLR 540
  541 KTSEIVWHGA DLYGKWLDVD LYKLSLQNKT PKETLETLAE FAKTRYEKYK SKYYLVCIKV 600
  601 SPSAWPIKVL ASNAMYRISK TILLLNQDVV KDNNTSQRLF EVVIVMIADI LGACLTNLPH 660
  661 VISVKGLHCA IEEREDSVRE AVYVLGKTMK IIEMLEKRAF PKVDCCRGTN IEDWRLMLKQ 720
  721 NMFSCPSVLS SLEENDICIV PPKLRDICLD ID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle