YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92872094
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPDGDLLSI EPLELKFPFE LKKQISCSLQ LSNKTDSYVA FKVKTTNPRK YCVRPNTGIV  60
   61 LPRSTCDVMV TMQAQKEAPA DMQCKDKFLL QSVKTNDGVS PKDISAEMFN KEAGHVVEEC 120
  121 KLRVVYVSPP QPPSPVPEGS EEGSSPRGSF SENGNANGPE FAQVTRGSAE RPEAQDKSAE 180
  181 ARALISRLTE EKNNAIQQTS RLRQELELLK REGNRNRGGV SFIIVILIGL LGLIMGYLMK 240
  241 KA

Type	Start	End	Confidence
Cytoplasmic	1	217	0.66
Transmembrane Helix	218	239	0.93
Non-Cytoplasmic	240	242	0.62