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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92870325
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGPLDRFAR PCFEGFSGSD EKRERRSDFE NSEDERRTRI GSLKKKALSA STKFKHSLRK  60
   61 KSSRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLIMDEL LPQAFDDYHM MLRFLKARKF 120
  121 DIEKAKHMWA DMLQWRREFG ADTIMQDFEF KELNEVVKYY PHGHHGVDKE GRPVYIERLG 180
  181 KVDPNKLMQV TTMDRYVKYH VQEFEKSFAI KFPACTIAAK RHIDSSTTIL DVQGVGLKNF 240
  241 TKSARELIQR LQKVDGDNYP ETLCQMFIIN AGPGFRLLWS TVKSFLDPKT TSKIHVLGNK 300
  301 YQSKLLEVID ASELPEFLGG TCSCADEGGC LRSDKGPWKN PEILKMVLNG EPRRARQVVK 360
  361 VLNSEGKVIA YAKPRYPMVK GSDTSTAESG SEAEDIASPK AMKSYSHLRL TPVREEAKIA 420
  421 GKASYANMSG YDEYVPMVDK PVDAEWKRQT SLQRSHTFKG TRPLPDIQNT PEGIKARAWV 480
  481 ALAAFFLTLF ALFRQVACRM TNKLPAISSN DDQRISEPTL ETTNMEVLPS TSQAQTEENL 540
  541 FPSLLKRLGE LEEKVDTLQS KPSEMPYEKA ELLNAAVCRV DALEAELIAT KKALYEALMR 600
  601 QEELLAYIDR QEEAKLRKKK FCW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle