YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92871234
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPKKPKLP FPLKTRLSIS LIMTLTDAAC RSNGSVNRRL LNFLDNKTSA KATPINGVST  60
   61 KDITVDAESK IWFRLFTPTG INASAGGGSN TETTSLPVVI FFHGGGFTFM SPASLSYDTI 120
  121 CRRFSRELNV VVVSVNYRRT PEYRYPTQYE DGETALKFLD ENKSVLPENV DVSKCFLAGD 180
  181 SAGANLAHHV AVRACKAGLQ RIRVAGLISM QPFFGGEERT EAEIRLEGSL MISMARTDWM 240
  241 WKVFLPEGSN RDHNAANVSG PNAEDLSRLD YPDTLVFVGG LDGLYDWQKR YYEWLKISGK 300
  301 KAQLIEYPNM MHGFYAFPNV PEASQLILQI KDFINNRVSN FI

Type	Start	End	Confidence
Signal Peptide	1	30	0.97
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	342	0.98