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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92869815
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDSNSNSNS SSTSSRTEPI GQNLIKLISN LCFSFFVFSV LIFTVIAITY QPPDPWLQSS  60
   61 PALTNLFTQP QNATFHIDTS VIKTGEDLTL SPQPSPADST PAVTEAVIEK SEENIANSSA 120
  121 TAPSSSSSSS CDELLGTLNC SDPRVLIAIQ RFNLRAFKSI SFFEYQTPVN GAVSGDCDVS 180
  181 WRFRNKREKS WRKYRDFRRF RLTVTDDCRY KVIHAGGFHS GVNARRNPVP RPRTGGKGKT 240
  241 LPRVTNRDDE INDTIPSLGS ETNFRNGKYL YYSRGGDYCK GMNHFMWSFL CGLGEAMFLN 300
  301 RTFVMDLSVC LGAMYNPSNK DEEGKDFRYY FDFEHLKEVA SIVEEGEFLR DWKRWDKTHL 360
  361 KKKKVPVRKV VTHKVTPMQL QKDKSTVIWR QFDSPEPENY WYRVCEGQAA KYIQRPWHAL 420
  421 WKSKRLMNIV SEISGRMDWD FDAVHVVRGE KAQNKELWPN LDSDTSPDAL LDKLKGLVQP 480
  481 WRNLYIATNE PYYNYFDKLR ANFKVHLLDD YKELWGNSSE WYNETSLLNN GKPVEFDGYM 540
  541 RVAVDTEVFY RGKTRVETFY NLTKDCKDGI NTC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle