YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92869647
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSSSFTSL VFARKVLGTI ITDIALCPSP TTQSWNLSTK GGQLVAFKGG ARFIQTSCRI  60
   61 SAPGTFPVND GKPQLRDKKV VPDADPPSTK DVNLLYQFFE KSTKLVVLTG AGISTECGIP 120
  121 DYRSPNGAYS SGFRPITHQE FLRSTRARRR YWARSYAGWR QFTAAQPSAA HCALAAFENA 180
  181 GRVDFMVTQN VDRLHHRAGS NPLELHGTVY NVICINCGYS LCRSLFQDQL KSLNPKWAEA 240
  241 IENLDHGNAG SDKSFGMKQR PDGDIEIDEK FWEEDFAIPT CQKCNGVLKP DVVFFGDNVP 300
  301 KERADMAMEA SRSCDAFLVL GSSVMTMSAF RLVRAAHEAG AATAIVNVGV TRADDFVPLK 360
  361 INARLGEILP RVLDMGSISV PSV

Type	Start	End	Confidence
Signal Peptide	1	18	0.76
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	383	0.97