YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92868446
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMRLALVVT TAVLLVIIGC SFAEQCGKQA GGALCPGGLC CSKFGWCGST GDYCGDGCQS  60
   61 QCSGSSGDLG SLISRDTFNN MLKHRDDSGC QGKRLYTYDA FISAAKAFPN FANNGDTATK 120
  121 KREIAAFLGQ TSHETTGGWA TAPDGPYAWG YCFVREQNPS STYCQPSSEF PCASGKQYYG 180
  181 RGPIQISWNY NYGQCGRAIG VDLLNNPDLV ATDPVISFKT ALWFWMTPQS PKPSCHDVIT 240
  241 GRWSPSSADR AAGRLPGYGT VTNIINGGLE CGRGQDGRVQ DRIGFYKRYC DILGVGYGDN 300
  301 LDCFSQRPFG SSLSLSSLFL NSIDT

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	325	0.99