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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92867978
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRISNEATV DLFPIGPSGI LARTIAFRVL FCKSISHLRY QLFLTLFDSF HRFRKFWGPI  60
   61 ISSLHPKNPQ GILAIITILA FLLKRYSNVK VRAELAYRRK FWRNMMRSAL TYEEWAHAAK 120
  121 MLDKETTLKT MNESDFYDVE LVRNKVQELR HRRQEGSLRD IIFCMRADLV RNLGNMCNPQ 180
  181 LHKGRLHVPR QIKEYIDEVA MQLRMVCHSD SEELSLEEKL AFMHETRHAF GRTALLLSGG 240
  241 ASLGAFHVGV VKTLVEHKLM PRIISGSSVG SIMCSIVATR SWPELQSFFE DSLHSLQFFD 300
  301 QMGGIFTIVK RVTTFGAVHE IRQLQIMLRH LTSNLTFQEA YDMTGRVLGI TVCSPRKHEP 360
  361 PRCLNYLTSP HVVIWSAVTA SCAFPGLFEA QELMAKDRSG EIVPYHPPFN LGPEEGSSQV 420
  421 RRWRDGSLEI DLPMMQLKEL FNVNHFIVSQ ANPHIAPLLR LKEFVRAYGG NFAAKLAHLV 480
  481 EMEVKHRCNQ ILELGFPLGG LAKLFAQDWE GDVTVVMPAT LAQYSKIIQN PSYVELQKAA 540
  541 NQGRRCTWEK LSAIKANCGI ELALDECVAI LNHMRRLKRS AERAASASHG LSSTVKFSAS 600
  601 KRIPSWNVIA RENSTGSLED FLADTAASFH HGVSSSSGAT GKNSKHHRSM HDVSDSESES 660
  661 AELNTWTRSG GPLMRTASAD MFTDFVQNLE VDTELNRGMG TNFSPRDSQY HSPRLTTPDR 720
  721 CSENSEPDQR ENGNKVVMNG SSIMVTEGDL LQPERIHNGI VFNVVKKEDL TPSSRSHDYD 780
  781 SEIAECLQIE CPGKEMDDAA SSASENGDDD SATARPLTET PDSNPTDNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle