YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92867960
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.86
Transmembrane Helix	12	33	0.88
Cytoplasmic	34	43	0.85
Transmembrane Helix	44	65	0.86
Non-Cytoplasmic	66	72	0.82
Transmembrane Helix	73	95	0.92
Cytoplasmic	96	105	0.87
Transmembrane Helix	106	128	0.92
Non-Cytoplasmic	129	145	0.94
Transmembrane Helix	146	166	0.94
Cytoplasmic	167	253	0.96
Transmembrane Helix	254	277	0.84
Non-Cytoplasmic	278	297	0.83
Transmembrane Helix	298	318	0.90
Cytoplasmic	319	328	0.82
Transmembrane Helix	329	352	0.84
Non-Cytoplasmic	353	366	0.81
Transmembrane Helix	367	386	0.60
Cytoplasmic	387	394	0.56
Transmembrane Helix	395	419	0.88
Non-Cytoplasmic	420	421	0.62

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFVQLLEVA SMPVIQVLLV SALGAFMATQ YFNNLLSPDF RKSLNKVVFF IFTPSLIFSS  60
   61 FAKSVSLQDM ISWWFMPVNV GLTFLIGGIL GWLLVKLLRP NLKVEGLIIA ACSSGNMGNL 120
  121 PIVIIPAICD EKGGPFGARD VCRSNALSYA SFSMALGGIF VWTYTFQTIR SSSLRFKALE 180
  181 AAEILKAPNK DLEGNVETPL LKGKDDENAV IEVLPSSYIE DSESQIVNEQ DQSHESKKEK 240
  241 QSFFKRIIEV VTHLLAELIS PPAISIFFGF LFGAVAWLRK LIIGDNAPFR VIQSTLELLG 300
  301 NGTIPCITLL LGGNLTAGLK SSSVKPLTLI CIIITRLFLL PVIGLFIVKA AASYGFLPVD 360
  361 PLFQYTLVMQ YAMPPAMNIS TMAQLFDVGN EECSVILLWT YSAAAIALTA WSTFLLWLLS 420
  421 Y