YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92867882
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLRSSSTIA ATSVGVCHTQ RLWSHSVTLN YRLSQFAGNP LLSNSAFVKW KRNIGSSNKN  60
   61 NRFRMATKAL AQPLQNADEL IDSVETFIFD CDGVIWKGDS LIEGVPETLD MLRSKGKRLV 120
  121 FVTNNSTKSR KQYGKKFETL GLNVNAEEIF ASSFAVAAYL KSIDFPKDKK VYVIGEDGIL 180
  181 KELELAGYQY VGGPEDGGKK IELKPGFLME HDEDVGAVVV GFDRYFNYYK VQYGTLCIRE 240
  241 NPGCLFIATN RDAVTHLTDA QEWAGGGSMV GALVGSTQRE PLVVGKPSTF MMDYLANEFG 300
  301 ISKSQICMVG DRLDTDILFG QNGGCKTLLV LSGVTTLPVL QSPNNSIQPD FYTNKISDFL 360
  361 SLKAAAV

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	367	0.99