YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92867830
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYFFTLFTF FIFLTFIALT NAGNIGINYG RIANNLPSAT KVVQLLKSQG ITHVKIYDTD  60
   61 PSVLRALSGS KIKLTVDLPN QQLFAAAKSQ SFALSWVERN IVAYQPNTII EAIAVGNEVF 120
  121 VDPNNSTKYL VPAMKNIYRS LQKHNLHNDI KVSSPIALSA LGNSYPSSSG SFRPELIQPV 180
  181 FKPMLDFLRE TGSYLMVNVY PFFAYESNAD VISLDYALFR ENPGQVDAGN GLRYLNLFDA 240
  241 QIDAVFAALS RLKYDDINVV VSETGWPSKG DGNEVGASVE NAAAYNANLV RKILTSKGTP 300
  301 LRPKADLTVF LFALFNENQK PGPTSERNFG LFYPDEKKVY NVPLTVEALK NYHDDPSPAS 360
  361 PVSGGGGSGG GGVSKSTTGN TWCVANPYAD KNKLQDALDF ACGEGGADCR PIQNNATCFD 420
  421 PNTLVAHASF AFNSYYQKQA RAGGSCYFGG TSYVVTQEPK YGKCEFPTGY

Type	Start	End	Confidence
Signal Peptide	1	22	0.90
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	470	0.98