YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91075651, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATHTLPLA SPGMARICLY GDLQRFGRRI DLRVKTGAEA IRALATQLPS FRQKLNEGWY  60
   61 QVRIAGRDAG ENELSARLNE PLANGAVIHI VPRLAGAKSG GVFQAVLGAA LIAVAWWNPV 120
  121 GWLGAAAVSG MYAAGASMIL GGVAQMLAPK ARTPRTQTTD NGKQNTYFSS LDNMVAQGNV 180
  181 MPVLYGEMRV GSRVVSQEIS TADEGDGGQV VVIGR

Type	Start	End	Confidence
Cytoplasmic	1	98	0.97
Transmembrane Helix	99	117	0.93
Non-Cytoplasmic	118	124	0.71
Transmembrane Helix	125	147	0.89
Cytoplasmic	148	215	0.99