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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91213038, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.50
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRLFRAARS GAKRHNHRIR LWLNNDDNAM KRKIFWICAV ALGMSAFPSF MTQATPATQP  60
   61 LINAEPAVTA QAEQNPQVGQ VMPGVQGADA PVVAQNGPSR DVKLTFAQIA PPPGSMVLRG 120
  121 INPNGSIEFG MRSDEVVTKA MLNLEYTPSP SLLPVQSQLK VYLNDELMGV LPVTKEQLGK 180
  181 KTLAQMPINP LFITDFNRVR LEFVGHYQDV CENPASTTLW LDVGRSSGLD LTYQTLNVKN 240
  241 DLSHFPVPFF DPRDNRTNTL PMVFAGAPDV ELQQASAIVA SWFGSRSGWR GQNFPVLYNQ 300
  301 LPDRNAIVFA TNDKRPDFLR DHPAVKAPVI EMINHPQNPY VKLLVVFGRD DKDLLQAAKG 360
  361 IAQGNILFRG ESVVVNEVKP LLPRKPYDAP NWVRTDRPVT FGELKTYEEQ LQSSGLEPAA 420
  421 INVSLNLPPD LYLMRSTGID MDINYRYTMP PVKDSSRMDI SLNNQFLQSF NLSSKQEANR 480
  481 LLLRIPVLQG LLDGKTDVSI PALKLGATNQ LRFDFEYMNP MPGGSVDNCI TFQPVQNHVV 540
  541 IGDDSTIDFS KYYHFIPMPD LRAFANAGFP FSRMADLSQT ITVMPKTPNE AQMETLLNTV 600
  601 GFIGAQTGFP AINLTVTDDG STIQGKDADI MIVGGIPDKL KDDKQIDLLV QATESWVKTP 660
  661 MRQTPFPGIV PDESDRAAET QSTLTSSGAM AAVIGFQSPY NDQRSVIALL ADSPRGYEML 720
  721 NDAVNDSGKR ATMFGSVAVI RESGINSLRV GDVYYVGHLP WFERLWYALA NHPILLAVLA 780
  781 AISVILLAWV LWRLLRIISR RRLNPDNE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle