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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117625719, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKPTFLRRV AIAALLTGSC FSTVAAPPVS YGVEEDVFHP VRAKQGMVAS VDATATQVGV  60
   61 DILKEGGNAV DAAVAVGYAL AVTHPQAGNL GGGGFMLIRS KNGNTTAIDF REMAPAKATR 120
  121 DMFLDDQGNP DSKKSLTSHL ASGTPGTVAG FSLALDKYGT MPLNKVVQPA FKLARDGFIV 180
  181 NDALADDLKT YGSEVLPNHE NSKAIFWKEG EPLKKGDKLV QANLAKSLEM IAENGPDEFY 240
  241 KGTIAEQIAQ EMQKNGGLIS KEDLAAYKAV ERTPISGDYR GYQVYSMPPP SSGGIHIVQI 300
  301 LNILENFDMQ KYGFGSADAM QIMAEAEKYA YADRSEYLGD PDFVKVPWQA LTNKAYAKSI 360
  361 ADQIDINKAK PSSEIRPGKL APYESNQTTH YSVVDKDGNA VAVTYTLNTT FGTGIVAGES 420
  421 GILLNNQMDD FSAKPGVPNV YGLVGGDANA VGPNKRPLSS MSPTIVVKDG KTWLVTGSPG 480
  481 GSRIITTVLQ MVVNSIDYGM NVAEATNAPR FHHQWLPDEL RVEKGFSPDT IKLLEAKGQK 540
  541 VALKEAMGST QSIMIGPDGE LYGASDPRSV DDLTAGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle