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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91074349, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNIFTKSM IGMGLVCSAL PALAMEAWNN QQGGNKYQVI FDGKIYENAW WVSSTNCPGK  60
   61 AKANDATNPW RLKRTATAAE ISQFGNTLSC EKSGSSSSST SNTPASNTPA NGASATPAQG 120
  121 TVPSNSSVVA WNKQQGGQTW YVVFNGAVYK NAWWVASSNC PGDAKGNDAS NPWRYVRAAT 180
  181 ATEISETSNP QSCTSAPQPA PDVKPAPDVK PAPDVQPAPA DKSNDNYAVV AWKGQEGSST 240
  241 WYVIYNGGIY KNAWWVGAAN CPGDAKENDA SNPWRYVRAA TATEITQYGN PASCSVKPDN 300
  301 NGGAVTPVDP TPETPETPVT PTPDNNEPST PADSSNDYSL QAWSGQEGSE IYHVIFNGNV 360
  361 YQNAWWVGSE DCPRGTSVEN SNNPWRLVRT ATAAEMSQYG NPTTCEIDNG GVIIADGFQA 420
  421 SKAYSANSIV DYNDAHYKTS VDQDAWGFVP GGDNPWKKYE PAKAWSASTV YVKGDRVVVD 480
  481 GQAYEALFWT QSDNPALIAN QNATGSNSRP WKPLGKTQSY SNEELNNAPQ FNPETLYASD 540
  541 TLIRFNGENY ISQSKVQKVS PSDSNPWRVF VDWTGTKERV GTPKKAWPKH VYAPYVDFTL 600
  601 NTIPDLAALA KSHNVNHFTL AFVVSKDANT CLPTWGTAYG MQNYAQYSKI KALREAGGDV 660
  661 MLSIGGANNA PLAASCKNVD DLMQHYYDIV DNLNLRVLDF DIEGTWVADQ ASIERRNLAV 720
  721 KKVQDKWKSE GKDIAIWYTL PILPTGLTPE GMNVLSDAKA KGVELAGVNV MTMDYGNAIC 780
  781 QSANTEGQNI HGKCATSAIA NLHSQLKGLH PNKSDAEIDA MMGTTPMVGV NDVQGEVFYL 840
  841 SDARLVMQDA QKRNLGMVGI WSIARDLPGG TNLSPEFHGL TKEQAPKYAF SEIFAPFTKQ 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle