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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91212439, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKQCHRRIV VGLIISPVRN TMYTRNLLWL VSLVSAAPLY AADVPANTPL APQQVFRYNN  60
   61 HSDPGTLDPQ KVEENTAAQI VLDLFEGLVW MDGEGQVQPA QAERWEILDD GKRYIFHLRS 120
  121 GLQWSDGQPL TAEDFVLGWQ RAVDPKTASP FAGYLAQAHI NNAAAIVAGK ADVTSLGVKA 180
  181 TDDRTLEVTL EQPVPWFTTM LAWPTLFPVP HHVIAKHGDS WSKPENMVYN GAFVLDKWVV 240
  241 NEKITARKNP KYRDAQHTVL QQVEYLALDN SVTGYNRYRA GEVDLTWVPA QQIPAIEKSQ 300
  301 PGELRIIPRL NSEYYNFNLE KPPFNDVRVR RALYLTVDRQ LIAQKVLGLR TPATTLTPPE 360
  361 VKGFSATTFD ELQKPMSERV AMAKVLLKQA GYDASHPLRF ELFYNKYDLH EKTAIALSSE 420
  421 WKKWLGAQVT LRTMEWKTYL DARRAGDFML SRQSWDATYN DASSFLNTLK SDSEENVGHW 480
  481 KNAQYDALLN QATQITDATK RNALYQQAEV IINQQAPLIP IYYQPLIKLL KPYVGGFPLH 540
  541 NPQDYVYSKE LYIKAH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle