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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91212183, gi|...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHPASPYCF TSSNFNWLRG PDLNRRPSGY EPDELPGCST PRPWMRTILC SRFHATFFLP  60
   61 RSRIRHDFEQ KQITKAYFLC KICVRERLLI SLNAVVCYLR CALFFNLKKR TMKGRWVKYL 120
  121 LMGTVVAMLA ACSSKPTDRG QQYKDGKFTQ PFSLVNQPDA VGAPINAGDF AEQINHIRNS 180
  181 SPRLYGNQSN VYNAVQEWLR AGGDTRNMRQ FGIDAWQMEG VDNYGNVQFT GYYTPVIQAR 240
  241 HTRQGEFQYP IYRMPPKRGR LPSRAEIYAG ALSDKYILAY SNSLMDNFIM DVQGSGYIDF 300
  301 GDGSPLNFFS YAGKNGHAYR SIGKVLIDRG EVKKEDMSMQ AIRHWGETHS EAEVRELLEQ 360
  361 NPSFVFFKPQ SFAPVKGASA VPLVGRASVA SDRSIIPPGT TLLAEVPLLD NNGKFNGQYE 420
  421 LRLMVALDVG GAIKGQHFDI YQGIGPEAGH RAGWYNHYGR VWVLKTAPGA GNVFSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle