YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117624503, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWIDYAIIA VIAFSSLVSL IRGFVREVLS LVTWGCAFFV ASHYYTYLSV WFTGFEDELV  60
   61 RNGIAIAVLF IATLIVGAIV NFVIGQLVEK TGLSGTDRVL GVCFGALRGV LIVAAILFFL 120
  121 DSFTGVSKSE DWSKSQLIPQ FSFIIRWFFD YLQSSSSFLP RA

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.80
Transmembrane Helix	6	25	0.85
Cytoplasmic	26	30	0.74
Transmembrane Helix	31	51	0.86
Non-Cytoplasmic	52	62	0.82
Transmembrane Helix	63	85	0.93
Cytoplasmic	86	98	0.84
Transmembrane Helix	99	120	0.90
Non-Cytoplasmic	121	162	0.75