YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91073120, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSIGGVYV LAFCRSSLKS KKYFIILLAL AAIAGLGTHA AWSSNGLPRI DNKTLARLAQ  60
   61 QHPVVVLFRH AERCDRSTNQ CLSDKTGITV KGTQDARELG NAFSADIPDF DLYSSNTVRT 120
  121 IQSATWFSAG KKLTVDKRFL QCGNEIYSAI KDLQRKAPDK NIVIFTHNHC LTYIAKDKRD 180
  181 ATFKPDYLDG LVMHVEKGKV YLDGEFVNH

Type	Start	End	Confidence
Signal Peptide	1	40	0.96
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	209	0.99