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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117624030, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNALYNLHI FRCRKPWILL TRNRPMSNLA AMLRLPANLK STQWQILAGP ILILLILSMM  60
   61 VLPLPAFILD LLFTFNIALS IMVLLVAMFT QRTLEFAAFP TILLFTTLLR LALNVASTRI 120
  121 ILMEGHTGAA AAGKVVEAFG HFLVGGNFAI GIVVFVILVI INFMVITKGA GRIAEVGARF 180
  181 VLDGMPGKQM AIDADLNAGL IGEDEAKKRR SEVTQEADFY GSMDGASKFV RGDAIAGILI 240
  241 MVINVVGGLL VGVLQHGMSM GHAAESYTLL TIGDGLVAQI PALVISTAAG VIVTRVSTDQ 300
  301 DVGEQMVNQL FSNPSVMLLS AAVLGLLGLV PGMPNLVFLL FTAGLLGLAW WIRGREQKAP 360
  361 AEPKPVKMAE NNTVVEATWN DVQLEDSLGM EVGYRLIPMV DFQQDGELLG RIRSIRKKFA 420
  421 QEMGFLPPVV HIRDNMDLQP ARYRILMKGV EIGSGDAYPG RWLAINPGTA AGTLPGEATV 480
  481 DPAFGLNAIW IESALKEQAQ IQGYTVVEAS TVVATHLNHL ISQHAAELFG RQEAQQLLDR 540
  541 VAQEMPKLTE DLVPGVVTLT TLHKVLQNLL DEKVPIRDMR TILETLAEHA PIQSDPHELT 600
  601 AVVRVALGRA ITQQWFPGKD EVHVIGLDTP LERLLLQALQ GGGGLEPGLA DRLLAQTQEA 660
  661 LSRQEMLGAP PVLLVNHALR PLLSRFLRRS LPQLVVLSNL ELSDNRHIRM TATIGGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle