YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91071380, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCRISTVCW RCCMATVNKQ AIAAAFGRAA AHYEQHADLQ RQSADALLAM LPQRKYTRVL  60
   61 DAGCGPGWMS RRWRERHAQV TALDLSPPML VQARQKDAAD HYLAGDIESL PLATATFDLA 120
  121 WSNLAVQWCG NLSTALRELY RVVRPGGVVA FTTLVQGSLP ELHQAWQAVD ERPHANRFLP 180
  181 PDEIEQSLNA VHYQHYIQPI TLWFDDALSA MRSLKGIGAT HLHEGRDPRI LTRSQLQRLQ 240
  241 LAWPQQQGRY PLTYHLFLGV IARE

Type	Start	End	Confidence
Signal Peptide	1	23	0.62
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	264	0.99