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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91209668, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQHFNYIRQ RGSGQPARKT MLQLKENKQF AFFQRLAFPL RIFLLILVFS IFVIAALAQY  60
   61 FTASFEDYLT LHVRDMAMNQ AKIIASNDSI ISAVKTRDYK RLATIADKLQ RDTDFDYVVI 120
  121 GDRHSIRLYH PNPEKIGYPM QFTKPGALEK GESYFITGKG SIGMAMRAKT PIFDDDGKVI 180
  181 GVVSIGYLVS KIDSWRAEFL LPMAGVFVVL LGILMLLSWF LAAHIRRQMM GMEPKQIARV 240
  241 VRQQEALFSS VYEGLIAVDP HGYITAINRN ARKMLGLSSP GRQWLGKPIA EVVRPADFFT 300
  301 EQIDEKRQDV VANFNGLSVI ANREAIRSGD DLLGAIISFR SKDEISTLNA QLTQIKQYVE 360
  361 SLRTLRHEHL NWMSTLNGLL QMKEYDRVLA MVQGESQAQQ QLIDSLREAF ADRQVAGLLF 420
  421 GKVQRARELG LKMVIVPGSQ LSQLPPGLDR TEFAAIVGNL LDNAFEASLR SDEGNKIVEL 480
  481 FLSDEGDDVV IEVADQGCGV PESLRDKIFE QGVSTRADEP GEHGIGLYLI ASYVTRCGGV 540
  541 ITLEDNDPCG TLFSIYIPKV KPNDSSINPI DR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle