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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115511916, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWLLDVFAT WLYGLKVIAI TLAVIMFISG LDDFFIDVVY WVRRIKRKLS VYRRYPRMSY  60
   61 RELYKPDEKP LAIMVPAWNE TGVIGNMAEL AATTLDYENY HIFVGTYPND PDTQRDVDEV 120
  121 CARFPNVHKV VCARPGPTSK ADCLNNVLDA ITQFERSANF AFAGFILHDA EDVISPMELR 180
  181 LFNYLVERKD LIQIPVYPFE REWTHFTSMT YIDEFSELHG KDVPVREALA GQVPSAGVGT 240
  241 CFSRRAVTAL LADGDGIAFD VQSLTEDYDI GFRLKEKGMT EIFVRFPVVD EAKEREQRKF 300
  301 LQHARTSNMI CVREYFPDTF STAVRQKSRW IIGIVFQGFK THKWTSSLTL NYFLWRDRKG 360
  361 AISNFVSFLA MLVMIQLLLL LAYESLWPDA WHFLSIFSGS AWLMTLLWLN FGLMINRIVQ 420
  421 RVIFVTGYYG LTQGLLSVLR LFWGNLINFM ANWRALKQVL QHGDPRRVAW DKTTHDFPSV 480
  481 TGDTRSLRPL GQILLENQVI TEEQLDAALR NRVEGLRLGG SMLMQGLISA EQLAQALAEQ 540
  541 NGVAWESIDA WQIPSSLIAE MPASVALHYA VLPLRLDNDE LIVGSEDGID PVSLAALTRK 600
  601 VGRKVRYVIV LRGQIVTGLR HWYARRRGHD PRAMLYNAVQ HQWLTEQQAG EIWRQYVPHQ 660
  661 FLFAEILTTL GHINRSAINV LLLRHERSSL PLGKFLVTEG VISQETLDRV LTIQRELQVS 720
  721 MQSLLLKAGL NTEQVAQLES ENEGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle