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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|218557082, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIKSTNHLT HIATFCALLY SNSALCAELV EYDHTFLMGK DASNIDLSRY TEGNPTLPGI  60
   61 YDVSVYVNDQ PIMSQSIAFA VIEGKKNAQA CITQKNLLQF HISSPDKNSE KAILLKRDDD 120
  121 LGDCLNLAEM IPQSSIRYDV NDQRLDIDVP QAWIMKNYQN YVDPSLWENG INAAMLSYNL 180
  181 NGYHSESPGR TNDSIYAAFN GGINLGAWRL RASGNYNWMT NVHSDYDFQN RYLQRDLASL 240
  241 RSQLVIGESY TTGETFDSVR IRGIRLYSDS RMLPPVLASF APIIHGVANT NAKVTVMQNG 300
  301 YKIYETTVPP GAFAIDDLSP SGYGSDLIVT IEEADGTKRT FSQPFSSVVQ MLRPGVGRWD 360
  361 ISAGQVLKDS IQDEPNLFQA SYYYGLNNYL TGYTGIQLTD NNYTAGLLGL GMNTPVGAFS 420
  421 VDVTHSNVSI PDDKTYQGQS YRISWNKLFE NTSTSLNIAA YRYSTQHYLG LNDALTLIDE 480
  481 VEHPEQDLEP KSMRNYSRMK NQVTVSINQP LKFEKKDYGS FYLSGSWSDY WASGQNSTNY 540
  541 SIGYSNSASW GSYSISAQRS LNEDGQTDDS IYLSFTIPIE NLLGTEHRSS GFQSIDTQLN 600
  601 SDFKGNNQLN ISSSGYSDTN RISYSVNTGY MMNKSSDDLS YIGGYASYES PWGTLSGSAS 660
  661 ASSDNSRQFS LNTDGGFVLH SGGLTFSNDS FSDSDTLAVI QAPGAKGARI NYGNSTVDRW 720
  721 GYGVTSALSP YHENRIALDI NDLENDVELK STSTVAVPRQ GAVVFADFET VQGQSAIMNI 780
  781 VRSDGKNIPF AADIYDEQNN IIGNVGQGGQ AFVRGIGQEG NIRITWIEEG KPVSCFAHYQ 840
  841 QNTTSEKIAQ SIILNGLRCQ IQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle