YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91801970, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLSGPKSM RTPLSRVRNL GAAHSGTKDF WRQRLTAVAM ILLIVPMIVV MMILLGRNQA  60
   61 GAAQILGSPP IAIIMLLFVV ASIWHMKIGM QVIIEDYVHD EKTKLASIMA NNFFSVTLAL 120
  121 AAAYAIFKLS SGV

Type	Start	End	Confidence
Cytoplasmic	1	34	0.96
Transmembrane Helix	35	56	0.93
Non-Cytoplasmic	57	64	0.76
Transmembrane Helix	65	86	0.91
Cytoplasmic	87	107	0.87
Transmembrane Helix	108	127	0.93
Non-Cytoplasmic	128	133	0.84