YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91798999, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSLPATKH SLRVRLALSA LGGCLALTLL VGTPVRADDL NPVLAKVNGS EIRQSDVNVA  60
   61 EEELGPGLAQ MDPAAKQENV LSFLIDMKII AKAAEDKKIE NSEDFKKRLA FARDRLLMDK 120
  121 LLASEGKAAI TDEAMKTVYA DASKQITSEE EVHARHILVP TEEEAKKVED ELKKGADFAE 180
  181 LAKKESKDPG ASDGGDLGFF TKEQMVPEFS KVAFALEPGK ISDPVKTQFG WHIIKVEEKR 240
  241 ARKAPAFDQV KPQIEQFVTR KAQADYVAKL RETAKIERLD KPAEPAKAGG DKTGPAKPAN 300
  301 GKTAPAKK

Type	Start	End	Confidence
Signal Peptide	1	37	0.99
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	308	0.99