YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSH6_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMASSSSAL SFPLSNIPTC SKKSQQFQKP ASLSKSSHTH KPSLKTQILH HKFTKRNLLS  60
   61 LTTALGFTSA LGTVLAHPAK AEPEAPIEAT SNRMSYSRFL QHLKENEVKK VDLIENGTVA 120
  121 IVEISNPVVG KIQRVRVNLP GLPVDLVREM KEKNVDFAAH PMNVNWGAFL LNFLGNLGFP 180
  181 LILLVSLLLT SSSRRNPAGP NLPFGLGRSK AKFQMEPNTG ITFEDVAGVD EAKQDFEEIV 240
  241 EFLKTPEKFS ALGAKIPKGV LLTGPPGTGK TLLAKAIAGE AGVPFFSLSG SEFIEMFVGV 300
  301 GASRARDLFN KAKANSPCIV FIDEIDAVGR MRGTGIGGGN DEREQTLNQI LTEMDGFAGN 360
  361 TGVIVIAATN RPEILDSALL RPGRFDRQVS VGLPDIRGRE EILKVHSRSK KLDKDVSLSV 420
  421 IAMRTPGFSG ADLANLMNEA AILAGRRGKD KITLTEIDDS IDRIVAGMEG TKMIDGKSKA 480
  481 IVAYHEVGHA ICATLTEGHD PVQKVTLVPR GQARGLTWFL PGEDPTLVSK QQLFARIVGG 540
  541 LGGRAAEDVI FGEPEITTGA AGDLQQVTEI ARQMVTMFGM SEIGPWALTD PAVKQNDVVL 600
  601 RMLARNSMSE KLAEDIDSCV KKIIGDAYEV AKKHVRNNRE AIDKLVDVLL EKETLTGDEF 660
  661 RAILSEYTDQ PLNTDGDVRI RINDLISV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle