YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91806708
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENSFLSSKL VFLLAIALVL FLNTELSFLT AEGASDSNSK VYIVYLGQRE HDDPELLTAS  60
   61 HHQMLESLLQ SKEDAHNSMI YSYQHGFSGF AALLTSSQAK KISEHPEVIH VIPNRILKLK 120
  121 TTRIWDHLGL SPIPTSFSSS SSAKAKGLLH NTSMGSEAII GVVDSGIWPE SKVFNDQGLG 180
  181 PIPKRWRGKC RSGEKFNATM HCNKKLIGAK YYQSGLLAMN GGKFNRIIIR DFKSNRDATG 240
  241 HGTHTATIAG GSFVPNASFY GLARGTVRGG APRARIASYK ACWNVVGWGG ICSSADMWNG 300
  301 L

Type	Start	End	Confidence
Signal Peptide	1	31	0.94
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	301	0.96