YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91806692
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLTSKRLYL LFLFALLKGA SVGPMIMLVI DFDSSVLVTA FVGTAVAFVC FSAAAMLATR  60
   61 REYLYHGASL ACCMSILWWV QIASSIFGGS TTVVKFELYF GLLIFVGYIV VDTQMITEKA 120
  121 HHGDMDYVQH SFTFFTDFAS LFVQILVLNM FRKMKKGRKD RRN

Type	Start	End	Confidence
Cytoplasmic	1	7	0.93
Transmembrane Helix	8	30	0.91
Non-Cytoplasmic	31	35	0.85
Transmembrane Helix	36	58	0.91
Cytoplasmic	59	63	0.82
Transmembrane Helix	64	87	0.72
Non-Cytoplasmic	88	130	0.83
Transmembrane Helix	131	151	0.91
Cytoplasmic	152	163	0.94