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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE39764
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILQLAMAY AIVMLTVLSL CAISSNGAVE GGGVYYMISR SLGPEFGGAI GVLFFVANVF  60
   61 SCALYISGFT EALMNNIGNG QFPDSPAWRF VYCVLVSLVL LVLSLLGSAL FAKTALITFV 120
  121 LISVCYGTWI VSVIFNGRME VLIPKVNTPA YRVLVNASDP SQGTVEDFNQ TLTANYTGWS 180
  181 FHTLGENMFP EYTMDYTTEK PTDFALMFAI IFSGVTGLMA GANMSGELAR PSVSIPRGTV 240
  241 QAVFMTLFVY VMTAFLMATT SSRYLLQNDY TVMMDTNFHR VFILIGIFST TLFSSMSNLI 300
  301 GSSRVLNRLS HDKLFGCLLR PAKIEIGDRN PVVSVVITWM CVVLVFLVGA MNKIAKLTSI 360
  361 FFLLSYMGVN VATLALELTS APNFRPTFKY FSWQTCALGV VATATMMLVV DASMSALGVV 420
  421 VLMSLIMVLH YQAPSVSSGS ISQALIYHQV RKYLLLLDVR KEHVKYWRPQ ILLLVSRPAS 480
  481 ACSLLDFVND LKKSGLYLVG HVRKGEMDSS QVVDPLQQVF PYWLSLIDYL KLKAFVELTM 540
  541 SNNIRHGIQQ LMRLSGLGAM KPNTVVIGFH ELAPSQVTLQ ESQLLKDLRF SKIDRAAVVE 600
  601 YFTAGDYMPK ELDGNLERLT PVDYVNVLKD VLHMTKNLCV ARHFSKLDKE ALARGWNGQK 660
  661 RYIDVWPVDL QKPQETGLGW DNSSLFLLQL SCILSMSSRW RSYTKLRVFI CVNSLQDMHR 720
  721 RERQLKNMLQ TLRIEGESSV VPWDHVVCHY QPPNATASAN TATPSVDLPP AYVSAFNDMV 780
  781 KRYSEDAAIT LLNLPVPPDN ADIDADRYLE MVRNLTDALP PTLLVHGVSS VISTAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle