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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92109870
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQSSKSGSA GVGGVGGGGG VVCPSTAISG CASGTALIQL DATGPGAGGA GESEHERGTW  60
   61 TGRFDFLLSL LGYSVGLGNV WRFPYLCYNN GGGAFLIPFT IMLVIAGLPL MFMELSFGQY 120
  121 AALGPVAVYR RFCPLFRGLG TGMILVSAIV MLYYNLIIAW TIFYMFASFA PVLPWQNCEP 180
  181 AWSTKYCFSY AQADQCEATN GTYYLRTCHN ATSAAENNIT TLALGALKRP PAEEYFNNFV 240
  241 LGLSKGIEET GSIKLSLAAC LFLAWTIVFL CLCKGVQSSG KVVYFTALFP YVVLVILFVR 300
  301 GVTLPGASTG ILFYLTPDWK QLANAQVWGD AAVQIFFALS PAWGGLITLS SYNKFSNNCY 360
  361 KDSLIVAFCN IATSFFAGLV IFSIIGFLAH ELNVDVEKVV DQGAGLAFIV YPEVVTRLPV 420
  421 SPVWAVLFFV MLLTLGLDSQ FALMETVTTA ILDRFPNLRQ YKIWVVLSVA IFGYIGGLGF 480
  481 TTNSGMYWLQ LMDKYAANWS VLLIAISECI LIAWIYGSQR FLNDIQGMIG KRSWFWNFFW 540
  541 GIMWRYITPA TLLFILFFNW VEYKPAKYGH YVYPMWADAV GWIVGLLPVL VIFLVAFQEI 600
  601 WRAPMSLSFR DRIKHLLQPT AEWGPAGRPC VNLHAERYQS QNYDGVTNTK ILIEEEASPK 660
  661 QAANKKDRQL TLDVDVDVEC LPLATVGKRP GAPKSMGKQG SSGNLQTNAL VPNSARGDIA 720
  721 LAKVAEKEKE ATACTFALAY GSAVKQINKW VLLPPRCIKC AGPAGQHDFG DEFTVKLPNN 780
  781 KVDVVFVVDI NVTPGVLSNL IAPAINDIRE SLRSRGFSDV QVGVIVFEET KRYPALLTSD 840
  841 GGKINYKGNV ADVKLAGIKS FCDNCVEQII TEKRILDIYN SLKEIVKGIA PQADEKAFQL 900
  901 ALDYPFRAGA AKSIIGVRSD SLEYKNWWKF VRAQLTGSIT KFDGALIHLI APVKGLSLEG 960
  961 VLSEKLIGFN SRLVATVDGK DSKKRTKLQF DNDMGIDFVL NNGGWVFATQ NFEKLKASDQ1020
 1021 KKMLNQITSS LADTLFKTEI VSDCRCLPIH GLHGQHKCVI KSSTFVANKK AKSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle