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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VM3AK_DEIAC
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQVLLVTIC LAAFPYQGSS IILESGNVND YEVVYPRKVT ALPEGAVQQK YEDAMQYEFK  60
   61 VNGEPVVLHL EKNKGLFSED YSETHYSPDG REITTYPSVE DHCYYHGRIQ NDADLTASIS 120
  121 ACNGLKGHFM LQGEMYLIEP LKLSDSEAHA VFKYENVEKE DEAPKMCGVT QNWKSYEPIK 180
  181 KASQSNLTPE QQRYLNAPKF VKLFLVADNI MYLKYGRSLT NVRTRMYDMA NILNLIFRRM 240
  241 NIHVAVTDLE IWSDKDKIIV QPSADDTLKS FATWRESVLL KHKSHDNAQL LTGINFNGPT 300
  301 AGLAYLGGIC DPMYSTAIVQ DHNKIHHLVA IAMAHEMGHN LGIDHDKDTC TCAAKSCVMA 360
  361 GTLSCEASYL FSDCSRKEHR AFLIKNMPQC ILKKPSKTDV VSPPVCGNYF VEMGEDCDCG 420
  421 SPATCRDPCC DAATCKLKQG AQCAEGLCCD QCRFKGAGTQ CRAAMDECDM ADLCTGQSAD 480
  481 CTDRFQKNGQ PCQNNNGYCY NGTCPTMIKQ CTVFFGSNAA VSQDACFQFN LQGNNYGYCR 540
  541 KEQNTKIACE PQNVKCGRLY CTSPEKQNPC NIYYSPSNED KGMVLPGTKC ADGKACSNGQ 600
  601 CVDVTTPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle