YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|122692469, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIWTSGRTS SSYRHDEKRN IYQKIRDHDL LDKRKTVTAL KAGEDRAILL GLAMMVCSIM  60
   61 MYFLLGITLL RSYMQSVWTE EAQCTLLNAS ITETFNCSFS CGPDCWKLSQ YPCLQVYVNL 120
  121 TSSGEKLLLY HTEETIKINQ KCSYIPKCGK NFEESMSLVN VVMENFRKYQ HFSCYSDPEG 180
  181 NQKSVILTKL YSSNVLFHSL FWPTCMMAGG VAIVAMVKLT QYLSLLCERI QRINR

Type	Start	End	Confidence
Cytoplasmic	1	47	0.93
Transmembrane Helix	48	69	0.94
Non-Cytoplasmic	70	199	0.93
Transmembrane Helix	200	220	0.89
Cytoplasmic	221	235	0.83