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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91094253
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGSKRTIY VGGLAEEVDD KVLNAAFIPF GDIVDIQIPL DYETEKHRGF AFIEFESAED  60
   61 AAAAIDNMND SELFGRTIRV NLAKPQRIKE GSTRPVWSED TWLQQHAGET IGKTINDPDD 120
  121 GTKEATDNDA DKSDSKKVKN PQVYFDIKIG KTEVGRITML LRADVVPRTA ENFRCLCTHE 180
  181 KGYGFQGSTF HRIIPDFMCQ GGDFTNHNGT GGKSIYGRKF VDENFELKHV GPGTLSMANS 240
  241 GPNTNGSQFF ICTAKTDWLD GKHVVFGHVI SGMDVVRRME RCGTKSGTPT EKVVIAACGE 300
  301 INKPIRHKDS NTFKFQPFAE RIANIDIDIF HRVGHSNEAD DETSECFFHQ AMENWSILNL 360
  361 TEGFDNFKKE IKAHTLVTLP QLILDKERVV EVLLKHLRLR NFLSLQPLLD LVVAVAKDLR 420
  421 KDFYQYYKPV LEVLISLLNT KNTEQLEWTF TCLAYILKFV WRPLLKDITT VFDTFLPLLS 480
  481 NSQPDYIHNF AASSFAFIAR KVKDWPTFLS HVLKSVKNRK DGVDGCGKLF FEVVSGVAGQ 540
  541 FHSCAETILP LFLESLSNAK FPQNILFEIL EKVVENIVEN IHPQKGQLWW DCLIGRLDSL 600
  601 LNNPEKSAKE IELTATKIAI LLLLAKNIKL TQEQASGITR KVLNLPQEQI LLYFVSNVSE 660
  661 FSAFEALVLP TFLQHCVKTG LNNDSLKVLT ELVLKKAPLS NCGINLPKWG KYPLDFRNQT 720
  721 IETKFLNHLN FSDFHNYVAA LICVPHLNLT DVSQVTGILS ENINKFLTQI ETGQSNITNV 780
  781 LFLLNSTVEC LIHLNEISYL SDNFDRIFDT LAPISSLLSL KTIDFLITVL KDRPHVINMA 840
  841 TLRKITANLV SGFSSPHHEI RLVTAHLYSL FEDLPEFDLR HSSDPDTPKE KFQIFTICYK 900
  901 IESIESQVQT YRDQLQNLEK LNFDKPQMIM CLKTEFRTIP LRYLCGTLYI NFKLLWEPVV 960
  961 QIIEGHAHGL EIGEFWEVFG AELRTVVGRV RDEGEKGEEF DAKWEVINEL WKKSGEFKSG1020
 1021 PDYANYRLLL WKALGLFPDI AEAKTRDVSD LLLDFIEKEY TKNNSAVATN WNIRQNTSQE1080
 1081 TETDEGLEDE KQETKPKKGK SNLQVLLTCL PVFTKIRSPK SIYREPELAK LYFDFLQHKN1140
 1141 SQVQKLALDC IMTYKHKFLT PYKDHLYNLV DDKNFKNELA AFQIDKESGT IQEEHRDDLV1200
 1201 PLIIRIVFSK MSTKTGLRTG GKSSGQLRRN LVLRFLAGCQ DKEMLAFVKM AFQYYSKFLD1260
 1261 DDPQVMVKGL ESITLESYIP PKRLQSAINL LNVILDQFGG LMGNELLTFI LQIVLIIGGV1320
 1321 LKIAFGQIGN VHAGYLAILR TLRTGAIKLV ERFFGQFERY QWTNKQINAI FHIFVWPYLD1380
 1381 KLNVEGIHSP TTLLKLFVQW GSNPRYFSLL VKHEDGRQDQ YVLPHVIRLL LNPKSHITVV1440
 1441 NAIEEMVEKL LTLQADEEDL QLVIPVDNLL PVPQHILDRI KLDDKLNYGS CILLPFVSSI1500
 1501 LEKIQRRLDG KNKNLNQRVL FILSWISELV WEADISDTTL KLLLPLALKR CSTPIGEEIV1560
 1561 VQLLTTISNL VGNVANPCAH LKQITPLFGE VSCASGRKIL VKVLKICLKE FGPDLVDGLN1620
 1621 AFDTKWLDQP DFQRRHDAFK EVHKAIDEGR IDLDLGVLLA YNCYYLLKSE KDLSMKENST1680
 1681 HCLKQLCPYL INKYPKQVDY ILNDTIFNLV RNGMKSRNDD FRNDCILLLG HLAKECPDSH1740
 1741 VVLRDLNKYT NKSDPEVDFF ENITHLQLHR HARALLKFCS ITKDLTNLPN IRTLTQFILP1800
 1801 LASHYLCNEK YVGKNSVIDA SIECLGTICR ILPWHQYEGL LKFYLRKLGR SVEYQKQLVR1860
 1861 VTVAILDAFH YDLSKAQAGE DVALTAPKPE VEDLGPETGL EHEDRGGDEE GEPQNEDVAP1920
 1921 SEEKNQSEDL DEEPLLDDGD ALKDEEEDAD DNQSVKLCEK VTVLCKSTAT RVTRSIQIVL1980
 1981 LPQLHRSLAE LTHYDTSHKV NRKKTSAERE EEDLLRVPIS LALVKLLQRL PKAILEANLP2040
 2041 GIFMKLCTFL KSHLESVRRV TRETLQKIMQ TLGPDYLGLL LGEMTPLLNR GFQVHVLIFT2100
 2101 IHAVLNCLKP MFEAYHIDKV LLTVLQLCQA DLFGSLSEEK EVAKIAVKTS EAKSTKSFDT2160
 2161 FQILAQYITD KCLMDLILPI KNVLQASHSY KTVYKAEECL RHVALGLVDN EFIEIKSLLI2220
 2221 FAYGTASESI PELVAQTKPQ LSDKEKQKKQ RERVDCYIIP KAPTGRSGVR NVKSSLKTNA2280
 2281 YLLVEFGLRL CYVLLKREKL KDEAFNPFLD PFIPVFLNCL TSKHVKLSTL TLQCLTWVMK2340
 2341 YDLPSLKDKI ATISSSIFEI LHKYASAGLS KGDNFDLVVA AFKTMAVLVR DVKYHTIDKE2400
 2401 QLKVLLLYAE QDMHDHDRQA TAFNLLKAII ARKLVVPEIH EVMAKVAELS ITSELSHVRV2460
 2461 QARVVFHQYL LDYPLGHQVE NHVSFYLNQM SYEMQYGRES AIEMISTLIS SFPKKNLIKY2520
 2521 SGTLFVTLGA RLVNDEAPEC RKQVSECLSS LLSRLGRKDC EALYDIVLLW LKDKKISHRR2580
 2581 LAAQLCGIFV TVEKALFESR LPSLLPLVLK QFGLKEEEDE EAERIKDHHL FQLLQMLLKI2640
 2641 CNNCPNFFKR EEIEDLSKHI QGLLGYPHDW VRLAAAQFLG FVLAQTEIEE LARLVANGES2700
 2701 GGSGYLTREP ITAIKALTLD LCDQLQPGNI KADLAEQVIK NLVFVARVLQ KVTSDKINLL2760
 2761 WLVKRMRKIV NSEIVEGSGT VLRTEVFKWI AAVVTVLDLD TITPIVTHLL APLVREMVTV2820
 2821 EESNAPLRHL AKEVGTLLKK RIGVETYTQT LSQLQQNLSV KRAERKRSRT QLAVTDPESF2880
 2881 AKKKIKRHEK KKEAKKRKLE QLKGAKRQFK RRKAVDLDPE SEAYDPTDPE VSSVLPPKGT2940
 2941 FEAFYPRGEE GGSSRAAHSH GSFYKFRNPA LVDAKNAAAY GFRFDGGRRA LSASPFLKQR3000
 3001 RISQREKVAL VPSFGNSPMA VSQPMTTTTT LMLVVYGLVD GMGVLDGLVM CKADNAIVMY3060
 3061 SRNVICVLLL GLWVESSESA KDKLHIKVKV PDLVHKHTHT KYVYLHDKKE PKKMHHHKGK3120
 3121 AKYQFSPFSY NYQPFFNDGY SKAKSWKTLR SEKYETETVS NPHSDYPGNK YIVKSNYKVR3180
 3181 EKLPYEDTTI GYDREFQYPS ADIESDYHKN EKLVDYENQK HDPFPKSGKL QGKKNGPKEY3240
 3241 YYIYKGPAPE YDYYKNDNDF FPLEHIQEFE KDAPKEKKKP KEVQYSYKVP SSDYDFHKSV3300
 3301 QLVDYYLKKN NNNPDFSSAP LQEEPKNTYN DVDYEVAKNE NSHFDPSIEY EFEKYKTDPE3360
 3361 YDHLDDRPRP SRPRSRPHDR RRTRLRGRRR TSPALRRRRP RSSARRGRFR GARPHRRRRR3420
 3421 RLHPQGRSRD RRRCRRSDWP FRSRGRLQSS AIPQRRRGRP RSRPRSRRAS RGRRRLHRRR3480
 3481 RRHGQFAAAA AAPVAHVLHD CVRVVDGLDF EGHVDDDLFV VVAVSNGLGG GLEGGGCGWR3540
 3541 VGVAYPWCPA SHRPSKERIP KEAICNGRGV LVLLAIVALP RTEALFSRPP FAPSPIHFHL3600
 3601 EDDGPPFIPK YSSLKFFSPS SVSSDKFPSW KKPPKYLVGK LPDWKVPDFV DDEKNLKEVV3660
 3661 LEEPFRPVSF DFNSLAKSKH RFDDVKPEMK AMLYMAVEEA PSSESVEPEV LTRHFANFDE3720
 3721 TFFHYSDKEL KKINTFYSEK LAEATRKFAN LNNELRVSLE HIRQGKRKDT DATKRHIPAR3780
 3781 KLQELKLAFS EFYLSLILLQ NYQTLNHTGF RKILKKHDKL LNTDVGAKWR QEHVETSHFF3840
 3841 TNRDIDKLIN DTESMVTNEL EGGDRQKAMK RLRVPPLGEQ QSPWTTFKVG LFSGSFIVLL3900
 3901 IAVVLSAIFH DGASENLKIA FRLYRGPLLI VEFLFLIGVN VYGWRSSGVN HVLIFELDPR3960
 3961 NHLSEQHLME MAAIFGVVWT LSLLSFLYSS SLSIPPYVNP LALTVIMVLF VINPLKVFRH4020
 4021 DARFWFVRIC GRMFGAPFFH VGFADFWLAD QLNSLANALL DFQFLICFYY THGDNWAEAG4080
 4081 DTAECMEKNF IIRPIVNCIP AWIRLAQCLR RYYDTKEAFP HLVNAGKYST TFFVVIFSTL4140
 4141 RSVYKSDYPD QSENPFLFLF IIASIVSSCY AYTWDIKMDW GLFDKSAGEN KFLREEIVYS4200
 4201 STFFYYFAIV EDFVLRFAWA LSFYLTENGY VSGDLMTSIL SPLEVFRRFV WNFFRLENEH4260
 4261 LNNCGKFRAV RDISVAPIDS SDQAQIIRMM DEADGVANRG ENEAKVESSE QPQDEAPTEQ4320
 4321 KSEATEPPRG ETGQDAASYD PKNVHYEGDL AVYTDPKTGT QYEWNSEKSE WRLREVKYSF4380
 4381 EGDTHVYTDK DGVKFFWDKE KKAWFPKVDD EFMAIYQLNY GFSENNSENS EEKKVDEEEP4440
 4441 KVDKSQPKPK GEKRKASEPT WFEVDETENT KVYVSNLPTD IEEQEFVDLM QKCGLVMKDP4500
 4501 TNGSFKVKLY KEPGTGYLKG DALCTYIKIE SVELALSLLD GYDYKGHKLK VERAKFQMKG4560
 4561 AYDPKLKPKM KKRKEKLKLK KMQEKLFDWR PEKPIDERAK HEKVVIVKNL FDPSIFDTDV4620
 4621 GLILEFQEDL REEVSKIGEV RKVMIYDRHP EGVAQINMSS PEEADEVVKL LNGRWFMKRQ4680
 4681 LTAEIWDGKT KFKIAETDAQ INERLENWDK FLEEDTPKNE SVHTMAPVQD FGGPKQYKKK4740
 4741 QEDQQLINLS LWNGIELKPF RKNFYIPHNN VKNRATQDVD SFREVKDIIV RGNDVPSPNL4800
 4801 CFDEGNFPEY IMQVILKQGF AEPTAIQSQG WPVVLSGRDL VGIAQTGSGK TLAYMLPAVV4860
 4861 HINNQQRPQR GEGPVALILA PTRELAQQIQ KVAHEFGSTT MVRNTCIFGG SPKGPQARDL4920
 4921 ERGVEIVIAT PGRLIDFLEK GTTNLQRCTY LVLDEADRML DMGFEPQIRK IIQQIRPDRQ4980
 4981 VLMWSATWPK QVQALAEEFL VDYIQVNIGG LSLAANHNIK QIVEVCEESE KEEKLCKLLK5040
 5041 EIGSDSCNKI IVFVETKKKV DDITKCIRRE GYAAISIHGD KSQPERDYVL SEFRTGKSSI5100
 5101 LVATDVAARG LDVEDVKYVI NFDYPNSSED YVHRIGRTGR CQQAGTAYAF FTSNNQRQAK5160
 5161 DLIAVLEEAG QNVSAELRDL AQNSRGSQNG RNRSYGKQNG GSYRGRGSEN GFGGGASRNG5220
 5221 FGGGSRFKNG GGGGGGSRFG GRSGGGGSPG NRLRKPNWDM KNLRPFKKDF YVPHPAVANR5280
 5281 SKYEVEQYRR SKEITIDGDA PNPIQNFEEA CFPDYVQHEI QKQGYDTPTA IQAQGWPIAM5340
 5341 SGKDLVGIAQ TGSGKTLAYI LPAIVHINNQ PSIARGDGPI ALVLAPTREL AQQIQQVAHD5400
 5401 FGSSSYVRNT CIFGGAPKGP QARDLERGVE ICIATPGRLI DFLEKGTTNL QRCTYLVLDE5460
 5461 ADRMLDMGFE PQIRKIIEQI RPDRQTLMWS ATWPKEVRKL AQDFLRNYVQ INIGSLQLSA5520
 5521 NHNILQIVDV CQEHEKETKL NNLLQEIGNN GEPGAKIIIF VETKKKVESI TRTIRRYGWP5580
 5581 AVCMHGDKSQ QERDFVLREF RNGKSSILIA TDVAARGLDV EGIKYVINYD YPNSSEDYIH5640
 5641 RIGRTGRSDT TGTSYAFFTP SNFRQAKDLV SVLKEANQNR LQVTYIHRLL YIGEHSFTPR5700
 5701 EIVEAMEKNY KLTNTGYCTE PLSGILLYYA NHFCYIAEGS EEALHKHLSL LFEHESERLE5760
 5761 NVRLLSAIHH VKARFWNEWM SHFGRPAERV EEFDSNSGLE SSMMYVTECC ERLYKFANAF5820
 5821 ISDQLKARAK REEESDSSGD DKPDVANLQR TRSLVERDPY YEYLPEVKLL RFLINCEYLK5880
 5881 TLKQYHRYYE HIGQSKDFSL KAWPAPKNFI PYDVFDEEYD PISDLPSVEG QDIVKEEELE5940
 5941 ELAGLCAPWG NNKDQPIERP FQRNRHVPKL SMPNSEFFRN NSVTRRSSLP PLSRNQFNSI6000
 6001 DKEMGCETSG YGSDNPTNNP ENQVTNQSGY ESSSSYKDDR PKWKDKNKFW DCGENDPPSW6060
 6061 VKRGLQRDEE IVVSNTSPAE SPQQHEEDVE RPYTSSSAFN RTFIRGQNIP VDSTELAERE6120
 6121 RRRQIAIAHQ EAIRQQLEER ERRRLEEKQK RIKEEQEEEL RIEREQEIER RRKENELRAI6180
 6181 REKQERERKR KEAIKEAKEF IASKQRPFEY TKKCEIVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle