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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91094043
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRLCLIFLT LGLTIIDAQR RNYSQFPCPS RCVCFRRTVR CMQLELTEVP KAPLPTVMLD  60
   61 LRFNKIRDIV PGSFKGHKAL RSLLLNNNSL KSLKNGIFTG LVQLRHLYLY KNRIKYIEDE 120
  121 VFHGLPKLEH LYLHNNELEE FKSGTFSNIP QLDRLFLYNN HISHIPAGAF QNLPKLTRLR 180
  181 LDQNALVCDC RIAWFAKMLN DNTIHVAANC RYPHEMYGKP LKGMTTRDFH CKAPEIMEGP 240
  241 QDVEISWGST AVFTCRVTGD PKPSIYWMRD DKEIEMNNDK YDIMDNGSLV IKHTDESDSG 300
  301 HYECMAKNED GEVKSRPARM ILVRPDQQFR GGNGSPVFLV TPVSVTTSES DPSVSLHCKA 360
  361 FGNPHPTITW SRNGIQLTTS QRHFIDEDGT LVIRPVKASD HGTYRCDATN SNGRISSEAD 420
  421 VIVNVAPVFT VHPQNTETTP GSTIKLECFA VGSPPPEITW FKDDLEVRSD GRLSISPDGS 480
  481 SLQIHNAKET DSGLYICEAR NHLGFREVSA KVKVTPLARK PPKFIYKPYN IEALVGSTIE 540
  541 LPCKADGDPT PGIQWQKDGA SLQRTGRTKV SLIGNLYIYG VVPDDQGRYE CAAINDFGRS 600
  601 TASCYVTVKE NQNPTDFGIG DKFVKIAFDE ASHEVDKAIN KTIDNLFHNK GPHSSADLFR 660
  661 LVRFPDAPAR ELARAAEVYE RTLVNIRKHV ERGMTMNASS NFNYREILSP DHLNLVAELS 720
  721 GCMTHRLARN CSDMCFHSKY RTIDGTCNNL QHPMWGASLT GFRRILKPIY ENGFSTPVGW 780
  781 NKGVKYYGFP KPSSRLVSTT LIATKRTTPD GEITHMVMQW GQFLDHDLDH AIPSVSSESW 840
  841 DGIDCKKSCD YAAPCYPMDV PPNDPRVTNR RCIDFIRSSA ICGSGMTSVF FDNIQHREQI 900
  901 NQLTSYIDAS QVYGFSEELA RDLRDLNSDG GRLREGPIFP NRKPLLPYAG NQGVDCRRNL 960
  961 SESTINCFVA GDIRANEQAG LIAMHTLWMR EHNRVARELK QLNPQWNSDT VYHESRKIIG1020
 1021 AAMQHLTYQH WLRFIIGEEG MQLLGEYKGY DPTVNPSISN VFATAALRFG HTLINPVLHR1080
 1081 LDWDFKPIRE GHLPLHKAFF SPWRIVDEGG IDPLLRGLFT VPAKIKKPDE NLNTALTEQL1140
 1141 FETAHAVALD LAAMNIHRSR DHAIPGYIEF RKFCNMTQVD SFEDLTGEIT DRSVLRKLQD1200
 1201 LYGHPGNIDV WVGGVLEDPV KGGRVGPLFR CLLIEQFRRL RDGDRFYYEN PSVFKPEQLV1260
 1261 QIKQYSLSRV LCDNGDNITR VSKNAFVLPE LQGGFSQCEE IPRVDLSVWS ECCSDCRYSG1320
 1321 QLNTISRLNA RNRRHLDEGF ANSTLKDGYF EENRKLKKRI VRMEKDLTSM KDTIQELERV1380
 1381 IRKLEREN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle