YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91092284
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.24
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYASYSEILL AVCILILPFL YESSHVFRYH LKFMLYYTIV MINSVILIPV FAFKAKNVRN  60
   61 LLTASAFCHH ISTLLGLRWV LRGREHLEKD QACIIVSNHQ SSIDILGMFD VWPVMDKCTV 120
  121 VAKKELFYAW PFGLAAWLCG LIFIPRMNSD KARVLMNDAA EEIKKDKIKL WVFPEGTRRN 180
  181 TGQIHPFKKG AFHIAISSKL PILPVVFSQY YFLDKQNKRF DHGKVIVTAL PPIPTENLSH 240
  241 DDLDELMERT RNAMSTTFHE VNKEMKESLV RPFSSQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.49
Transmembrane Helix	8	26	0.79
Cytoplasmic	27	32	0.65
Transmembrane Helix	33	53	0.94
Non-Cytoplasmic	54	60	0.62
Transmembrane Helix	61	81	0.74
Cytoplasmic	82	125	0.69
Transmembrane Helix	126	147	0.81
Non-Cytoplasmic	148	194	0.59
Transmembrane Helix	195	212	0.24
Cytoplasmic	213	276	0.57