YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91090155
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPSRGPTVI TVRPSAKSRG INCCCCNCCT CLNLQFLRSE PGVLKILELF LGSFCQSLAL  60
   61 NYGLDFSGTM GPSYQSFLTA VAWCIMTTTL LLFCYVISEK TCSLVRQSLF ETVFNATACF 120
  121 SYLSTCSYLG YIVNMFLKPM YVTVPYFQAY PAMSAAYMIG GLVGAIHGYD AYKCYKYYKG 180
  181 YR

Type	Start	End	Confidence
Cytoplasmic	1	42	0.89
Transmembrane Helix	43	64	0.78
Non-Cytoplasmic	65	75	0.86
Transmembrane Helix	76	97	0.93
Cytoplasmic	98	111	0.88
Transmembrane Helix	112	132	0.91
Non-Cytoplasmic	133	148	0.84
Transmembrane Helix	149	169	0.90
Cytoplasmic	170	182	0.87